BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB017B07LP1|AL427116
(419 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1802 738 0.0
>3x_Contig1802
Length = 45229
Score = 738 bits (371), Expect = 0.0
Identities = 408/419 (97%), Gaps = 3/419 (0%)
Strand = Plus / Plus
Query: 1 taactacatcttgtagtttcaagttctctctaagtatmccctgagacaacaatgtaacca 60
|||| |||||||| |||||||||||||||| |||||| ||||||| ||||||||||||||
Sbjct: 2833 taaccacatcttg-agtttcaagttctctc-aagtatcccctgagtcaacaatgtaacca 2890
Query: 61 cacagatttctttcttttgacagatttatcagctatgtcaaagtttgtataaataccagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2891 cacagatttctttcttttgacagatttatcagctatgtcaaagtttgtataaataccagg 2950
Query: 121 caatatgggaggaacagtatcgcatgtcatttgagaagatgttaaagattactcttgtag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2951 caatatgggaggaacagtatcgcatgtcatttgagaagatgttaaagattactcttgtag 3010
Query: 181 ttatcaattattatcattcacacggtagaaccaaaccaaggtaacctaatttagcttttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3011 ttatcaattattatcattcacacggtagaaccaaaccaaggtaacctaatttagcttttc 3070
Query: 241 aaccaaacgaaaaaccacaacawgcatttccaaccagtacnttctttcttaattgccgcc 300
|||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||
Sbjct: 3071 aaccaaacgaaaaaccacaacatgcatttccaaccagtactttctttcttaattgccgcc 3130
Query: 301 gcgggctttgttagcactgttacctccgctgacagtgacgcttctgaaaagtttnancnt 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||| | | |
Sbjct: 3131 gcgggctttgttagcactgttacctccgctgacagtgacgcttctgaaaagttt-atctt 3189
Query: 361 agaaccaagngacttggaatctatcatcaaagccttgcaagaagttgaccataccatcg 419
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3190 agaaccaagtgacttggaatctatcatcaaagccttgcaagaagttgaccataccatcg 3248
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3192
Number of Sequences: 1807
Number of extensions: 3192
Number of successful extensions: 90
Number of sequences better than 1.0e-20: 1
length of query: 419
length of database: 10,358,551
effective HSP length: 16
effective length of query: 403
effective length of database: 10,329,639
effective search space: 4162844517
effective search space used: 4162844517
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)